DatasetT11b high vs low squamous_GSEA_Ranked
PhenotypeNoPhenotypeAvailable
Upregulated in classna_pos
GeneSetHALLMARK_ALLOGRAFT_REJECTION
Enrichment Score (ES)0.47837824
Normalized Enrichment Score (NES)2.3744507
Nominal p-value0.0
FDR q-value2.5641028E-4
FWER p-Value0.001
Table: GSEA Results Summary



Fig 1: Enrichment plot: HALLMARK_ALLOGRAFT_REJECTION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

SYMBOLRANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1Fcgr2b622.6100.0395Yes
2Ctss632.5820.0938Yes
3Itgb2712.4810.1442Yes
4Igsf61181.9980.1748Yes
5Il1b1291.9120.2125Yes
6Spi11581.7650.2427Yes
7Cfp1711.7170.2758Yes
8Mmp92491.4490.2872Yes
9Ptprc2581.4300.3153Yes
10Srgn2701.3920.3418Yes
11Capg3431.1600.3484Yes
12Ets13961.0610.3578Yes
13Gpr654011.0470.3789Yes
14Flna4710.9460.3817Yes
15Tnf4950.9070.3951Yes
16Hcls15030.8970.4122Yes
17Cdkn2a5090.8890.4296Yes
18Stab15230.8730.4448Yes
19Irf75480.8470.4566Yes
20Ifnar25670.8300.4696Yes
21Hif1a6840.6830.4553Yes
22Was7700.6100.4471Yes
23Tgfb28000.5930.4524Yes
24Lcp28400.5700.4548Yes
25Cd748490.5670.4647Yes
26B2m8600.5630.4741Yes
27Degs18900.5440.4784Yes
28Il151933-0.6810.2354No
29Ccnd32040-0.7000.2239No
30Fas2311-0.7640.1733No
31F2r2690-0.8720.0983No
32Socs52778-0.9000.0957No
33Ly752931-0.9500.0782No
34Tap13068-1.0040.0657No
35Il183078-1.0100.0847No
36Traf23325-1.1270.0476No
37Tlr23387-1.1560.0569No
38Eif3j13797-1.506-0.0125No
39Gcnt13892-1.7060.0001No
40Ereg4031-2.2970.0143No
Table: GSEA details [plain text format]



Fig 2: HALLMARK_ALLOGRAFT_REJECTION: Random ES distribution   
Gene set null distribution of ES for HALLMARK_ALLOGRAFT_REJECTION